Step 1: Understanding polypeptide incorporation.
Amino acids that are directly encoded by the genetic code are incorporated into polypeptides during translation. Some modified amino acids, such as 4-hydroxyproline and ( gamma)-carboxyglutamate, are formed post-translationally but are part of polypeptides.
Step 2: Evaluating the given pairs.
- (A) 4-Hydroxyproline and ( gamma)-carboxyglutamate: Both are post-translational modifications found in proteins.
- (B) ( gamma)-Carboxyglutamate and desmosine: These are also post-translational modifications and part of polypeptides.
- (C) Ornithine and citrulline: These amino acids are not incorporated into polypeptides. They are intermediates in metabolic pathways (urea cycle and arginine biosynthesis).
- (D) 4-Hydroxyproline and 5-hydroxylysine: Both are post-translational modifications found in proteins like collagen.
Step 3: Conclusion.
The pair Ornithine and Citrulline are NOT incorporated into polypeptide chains, as they function outside the context of protein synthesis.