The given hyperbola is \(\frac{x^2}{a^2} - \frac{y^2}{b^2} = 1\). For a hyperbola, the focal distance of any point \(P(x_1, y_1)\) is \(|e \cdot x_1|\), where \(e\) is the eccentricity. The eccentricity \(e\) is given by:
\[e = \frac{\sqrt{a^2 + b^2}}{a}\]
The difference between the focal distances of any point on the hyperbola is \(2a\), and it's given as 6:
\[2a = 6 \implies a = 3\]
The coordinates of the end points of the latus rectum are \(\left(\pm ae, \pm \frac{b^2}{a}\right)\). Given \((\sqrt{13}, k)\) is one of them:
\[\text{Since } x = \sqrt{13}, \sqrt{13} = ae\]
\[e = \frac{\sqrt{13}}{3}\]
Substituting \(e\) in \(b^2 = a^2(e^2 - 1)\):
\[b^2 = 9 \left(\left(\frac{\sqrt{13}}{3}\right)^2 - 1\right) = 9 \left(\frac{13}{9} - 1\right) = 9 \times \frac{4}{9} = 4\]
The \(y\)-coordinate of the end point of the latus rectum, \(k\), is:
\[k = \pm \frac{b^2}{a} = \pm \frac{4}{3}\]
Thus, the value of \(k\) is \(\frac{4}{3}\).