Question:

Which scoring matrix is primarily used in amino acid sequence alignment?

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Use PAM for amino acid sequence alignments to assess evolutionary relationships and sequence similarity.
Updated On: Jun 18, 2025
  • PAM
  • BLAST
  • T-Coffee
  • GFF
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The Correct Option is A

Solution and Explanation

PAM (Point Accepted Mutation) is the most commonly used scoring matrix for amino acid sequence alignment, as it quantifies evolutionary changes based on mutation rates.
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